L’édition 2019 du colloque GT MASIM (Méthodes Algorithmiques pour les Structures et Interactions Macromoléculaires) a eu lieu le Mardi 5 Novembre 2019 à Paris, dans le cadre des journées du GDR BIM , dont la journée plénière a eu lieu le lendemain.
Programme de la journée
Le programme de la journée MASIM 2019 est disponible au format PDF, ou ci-dessous.
| 09:00-09:15 | Frédéric Cazals & Yann Ponty | |
| Introduction journée, présentation des actions MASIM | ||
| 09:15-09:40 | Hommage à Dave Ritchie (CAPSID@INRIA/LORIA) | |
| Dave à Nancy par Bernard Maigret (CNRS/Inria CAPSID) Quelques contributions de Dave par Sergei Grudinin (CNRS/Inria NANO-D) |
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| 09:40-10:00 | Marie-Elisa Ruiz-Echartea | LORIA, University of Lorraine |
| EROS-DOCK: Exhaustive Rotational Search for pairwise and multi-body protein docking | ||
| 10:00-10:30 | Pause café | |
| 10:30-11:15 | Michael Nilges (Keynote) | Institut Pasteur |
| Integrative structural biology, a Bayesian view | ||
| 11:15-11:35 | Guillaume Postic | IFB, Universite Paris-Saclay |
| Integration of MS-based proteomics and structural data for probing protein interaction networks | ||
| 11:35-11:55 | Chloé QUIGNOT | CEA Saclay |
| Taking evolutionary information to the atomic level in protein docking | ||
| 11:55-12:15 | Didier Devaurs | Univ. Grenoble Alpes |
| Studying Protein Structure through Hydrogen Exchange and Coarse-grained Conformational Sampling | ||
| 12:15-14:00 | Buffet et session posters | |
| 14:00-14:20 | Frederic Cazals | Inria |
| Multiscale analysis of structurally conserved motifs within flexible alignments | ||
| 14:20-14:40 | Elodie Laine | Sorbonne Université |
| Evolutionary decomposition and structural characterization of functionally distinct protein isoforms | ||
| 14:40-15:00 | Benjamin Bouvier | CNRS / Université de Picardie Jules Verne |
| Curvature as a collective coordinate in enhanced sampling membrane simulations | ||
| 15:00-15:20 | Juan Cortés | LAAS-CNRS |
| Protein loops with multiple meta-stable conformations: a challenge for sampling and scoring methods | ||
| 15:30-16:00 | Pause café | |
| 16:00-16:45 | Eric Westhof (Keynote) | Univ. Strasbourg/IBMC |
| From RNA Architecture to Automatic RNA Modeling: RNA Puzzles | ||
| 16:45-17:05 | Yann Ponty | CNRS/LIX, Ecole Polytechnique |
| Integrative Probing Analysis of Nucleic Acids Empowered by Multiple Accessibility Profiles | ||
| 17:05-17:25 | Audrey Legendre | IBISC, Univ Evry, Université Paris-Saclay |
| Prédiction de structures secondaires de complexes d’ARN | ||
| 17:25-17:45 | Sergei Grudinin | CNRS / Inria |
| Novel methods for integrative structural bioinformatics | ||
| 17:45-18:05 | Vaitea Opuu | Ecole Polytechnique |
| Computational design of proteins and enzymes | ||
Lieu et accès
Amphi Turing (niveau -1) – Bat. Sophie Germain Université Paris Diderot 1 Place Aurélie Nemours 75013 Paris Accès en transport en commun :
- Tramway : Ligne T3A, arrêt Avenue de France
- Train : RER C & Metro 14, arrêt Bibliothèque François Mitterrand
